Protein ZmbZIP16 | |
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Information | |
TF Name: | ZmbZIP16 |
Species: | Maize |
TF Family: | bZIP |
Gene Name(Synonym): | BZIP16 |
Uniprot ID: | K7U4A3 |
ZmbZIP16 is a protein in the bZIP family.
Overview of domains present in v5 transcripts | ||
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PF00170 | PF07716 | |
Zm00001eb199200_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d052807 | DAPseq | sequence | fimo | position | |
Zm00001d052807 | DAPseq | sequence | fimo | position | |
Zm00001d052807 | ChIPseq | sequence | fimo | position | |
Zm00001d052807 | PChIPseq | sequence | fimo | position |
MYHHHFHGEVDSLRFLSPPTTASFAAAHHQHMNMPLPPPAYYLAIDGDAACFDELDTIVREAAAHLGGNSNNESPSLSGS
GSDSAAAADQERRRRRMVSNRESARRSRVRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCADARRENARLRDEKAQL
ANRLHQLLIIAG
MYHHHFHGEVDSLRFLSPPTTASFAAAHHQHMNMPLPPPAYYLAIDGDAACFDELDTIVREAAAHLGGNSNNESPSLSGS
GSDSAAAADQERRRRRMVSNRESARRSRVRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCADARRENARLRDEKAQL
ANRLHQLLIIAG
MYHHHFHGEVDSLRFLSPPTTASFAAAHHQHMNMPLPPPAYYLAIDGDAACFDELDTIVREAAAHLGGNSNNESPSLSGS
GSDSAAAADQERRRRRMVSNRESARRSRVRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCADARRENARLRDEKAQL
ANRLHQLLIIAG
MYHHHFHGEVDSLRFLSPPTTASFAAAHHQHMNMPLPPPAYYLAIDGDAACFDELDTIVREAAAHLGGNSNNESPSLSGS
GSDSAAAADQERRRRRMVSNRESARRSRVRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCADARRENARLRDEKAQL
ANRLHQLLIIAG
MYHHHFHGEVDSLRFLSPPTTASFAAAHHQHMNMPLPPPAYYLAIDGDAACFDELDTIVREAAAHLGGNSNNESPSLSGS
GSDSAAAADQERRRRRMVSNRESARRSRVRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCADARRENARLRDEKAQL
ANRLHQLLIIAG
MYHHHFHGEVDSLRFLSPPTTASFAAAHHQHMNMPLPPPAYYLAIDGDAACFDELDTIVREAAAHLGGNSNNESPSLSGS
GSDSAAAADQERRRRRMVSNRESARRSRVRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCADARRENARLRDEKAQL
ANRLHQLLIIAG
MYHHHFHGEVDSLRFLSPPTTASFAAAHHQHMNMPLPPPAYYLAIDGDAACFDELDTIVREAAAHLGGNSNNESPSLSGS
GSDSAAAADQERRRRRMVSNRESARRSRVRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCADARRENARLRDEKAQL
ANRLHQLLIIAG
MYHHHFHGEVDSLRFLSPPTTASFAAAHHQHMNMPLPPPAYYLAIDGDAACFDELDTIVREAAAHLGGNSNNESPSLSGS
GSDSAAAADQERRRRRMVSNRESARRSRVRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCADARRENARLRDEKAQL
ANRLHQLLIIAG
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF07716 |
|
PF00170 |
|
PF07716 |
|
PF00170 |
|
Hover here to show all domains |
TATATATAATATGGTGGACCAAACC...
TATATATAATATGGTGGACCAAACCAAAGTCTTCTCCTCTAGCTGTGTGCCTGTGTGTCTGTGTCCACTATAAAAGGACCTCACCAACCCAGGCCGCCTTCTCCAGAGGCCAGAGCAAGCATCTAGCTACCATTCACAACACAAGTAATATGTACCACCATCATTTCCATGGCGAGGTGGACAGCCTCCGCTTCCTGTCCCCTCCGACGACCGCTTCCTTCGCCGCCGCGCACCACCAGCACATGAACATGCCCTTGCCGCCTCCGGCATACTACTTAGCCATCGACGGCGACGCGGCTTGCTTTGATGAGCTTGACACCATCGTGCGGGAAGCCGCAGCCCACCTCGGCGGCAACAGCAACAATGAGTCGCCCAGCCTGTCGGGCTCGGGCTCCGACAGCGCAGCGGCGGCCGACCAGGAGCGCCGGCGCCGCCGGATGGTGTCCAACCGCGAGTCGGCGCGGCGGTCGCGCGTGCGCAAGCAGCGGCAGCTCAGCGAGCTGTGGGCGCAGGTGTCGCACCTCCGCGGCGCCAACCGCCGCCTCCTCGACGACCTCAACCGCGCTCTCAGGAGCTGCGCCGACGCCCGCCGCGAGAACGCGCGCCTCAGGGACGAGAAGGCCCAGCTGGCCAACAGGCTCCACCAGCTGCTCATCATCGCCGGCTGATGTGGAGGAGCCACATAACAACACCATCAGCAGCACCAGTATTGCTGAATGATCGTCGAACGCCCAGTTTTTTTTGTTTTGTTTGTTACTCGAGAGAGAGAGAGAGGACAATTATATATCGATAATAAGGACG
MYHHHFHGEVDSLRFLSPPTTASFAAAHHQHMNMPLPPPAYYLAIDGDAACFDELDTIVREAAAHLGGNSNNESPSLSGS
GSDSAAAADQERRRRRMVSNRESARRSRVRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCADARRENARLRDEKAQL
ANRLHQLLIIAG
CCCATACTTGCATGCAATCCAAGCT...
CCCATACTTGCATGCAATCCAAGCTACCCAACTCTACTCGATCGACAAGATTCTCAAAACACTAAAAAGATATATAAAAGGAAAAATAATGGTGAAACAAAATAATATATATAATATGGTGGACCAAACCAAAGTCTTCTCCTCTAGCTGTGTGCCTGTGTGTCTGTGTCCACTATAAAAGGACCTCACCAACCCAGGCCGCCTTCTCCAGAGGCCAGAGCAAGCATCTAGCTACCATTCACAACACAAGTAATATGTACCACCATCATTTCCATGGCGAGGTGGACAGCCTCCGCTTCCTGTCCCCTCCGACGACCGCTTCCTTCGCCGCCGCGCACCACCAGCACATGAACATGCCCTTGCCGCCTCCGGCATACTACTTAGCCATCGACGGCGACGCGGCTTGCTTTGATGAGCTTGACACCATCGTGCGGGAAGCCGCAGCCCACCTCGGCGGCAACAGCAACAATGAGTCGCCCAGCCTGTCGGGCTCGGGCTCCGACAGCGCAGCGGCGGCCGACCAGGAGCGCCGGCGCCGCCGGATGGTGTCCAACCGCGAGTCGGCGCGGCGGTCGCGCGTGCGCAAGCAGCGGCAGCTCAGCGAGCTGTGGGCGCAGGTGTCGCACCTCCGCGGCGCCAACCGCCGCCTCCTCGACGACCTCAACCGCGCTCTCAGGAGCTGCGCCGACGCCCGCCGCGAGAACGCGCGCCTCAGGGACGAGAAGGCCCAGCTGGCCAACAGGCTCCACCAGCTGCTCATCATCGCCGGCTGA
MNMPLPPPAYYLAIDGDAACFDELDTIVREAAAHLGGNSNNESPSLSGSGSDSAAAADQERRRRRMVSNRESARRSRVRK
QRQLSELWAQVSHLRGANRRLLDDLNRALRSCADARRENARLRDEKAQLANRLHQLLIIAG
ATGAACATGCCCTTGCCGCCTCCGG...
ATGAACATGCCCTTGCCGCCTCCGGCATACTACTTAGCCATCGACGGCGACGCGGCTTGCTTTGATGAGCTTGACACCATCGTGCGGGAAGCCGCAGCCCACCTCGGCGGCAACAGCAACAATGAGTCGCCCAGCCTGTCGGGCTCGGGCTCCGACAGCGCAGCGGCGGCCGACCAGGAGCGCCGGCGCCGCCGGATGGTGTCCAACCGCGAGTCGGCGCGGCGGTCGCGCGTGCGCAAGCAGCGGCAGCTCAGCGAGCTGTGGGCGCAGGTGTCGCACCTCCGCGGCGCCAACCGCCGCCTCCTCGACGACCTCAACCGCGCTCTCAGGAGCTGCGCCGACGCCCGCCGCGAGAACGCGCGCCTCAGGGACGAGAAGGCCCAGCTGGCCAACAGGCTCCACCAGCTGCTCATCATCGCCGGCTGA
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